BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB004F05LP1|AL425273
(1002 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1680 1778 0.0
>3x_Contig1680
Length = 12597
Score = 1778 bits (895), Expect = 0.0
Identities = 959/971 (98%), Gaps = 8/971 (0%)
Strand = Plus / Minus
Query: 1 caaaatccacagggcacaatccggaattgtttgcaatattaggatcagcaccataatcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9344 caaaatccacagggcacaatccggaattgtttgcaatattaggatcagcaccataatcca 9285
Query: 61 acaatgcttcgacaatggcaacgtttccaagcctggcggcaatatttaaacaggtatcac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9284 acaatgcttcgacaatggcaacgtttccaagcctggcggcaatatttaaacaggtatcac 9225
Query: 121 cattagaatctctagcattgagtaaatgagtgataacccattgaagatcgatatcttcta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9224 cattagaatctctagcattgagtaaatgagtgataacccattgaagatcgatatcttcta 9165
Query: 181 gtagcatcgcaatgcgattctttagttctgctttgctttttaactatccaacccatcaaa 240
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9164 gtagca-cgcaatgcgattctttagttctgctttgctttttaactatccaacccatcaaa 9106
Query: 241 atatcgaggtaatacttagccgctgcattacaaccaggcataccagaagtaatcacaata 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9105 atatcgaggtaatacttagccgctgcattacaaccaggcataccagaagtaatcacaata 9046
Query: 301 tgatgaagaacggttctatccatgtcatcaaccattacgatacaagggtacaagtagtcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9045 tgatgaagaacggttctatccatgtcatcaaccattacgatacaagggtacaagtagtcc 8986
Query: 361 aacagtatctcgaatgtaccagaatcgtaattgtttaccgacttcacagattttacaagc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8985 aacagtatctcgaatgtaccagaatcgtaattgtttaccgacttcacagattttacaagc 8926
Query: 421 actgattcaccggacttatcgccgattcttctatcactgccaaagacaatgagctgtttg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8925 actgattcaccggacttatcgccgattcttctatcactgccaaagacaatgagctgtttg 8866
Query: 481 agaaggtctagattggctatggaacacagccaatgcaaggragtgtttccatgttcatca 540
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 8865 agaaggtctagattggctatggaacacagccaatgcaaggaagtgtttccatgttcatca 8806
Query: 541 attgggatgttaaaatttagtggaacgtttgggaattgtgtgtccagttcttgtacctgc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8805 attgggatgttaaaatttagtggaacgtttgggaattgtgtgtccagttcttgtacctgc 8746
Query: 601 tgggttaagctgaccgatgggtaaccttctgcaacgttcaaattcgtagtttcggggaaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8745 tgggttaagctgaccgatgggtaaccttctgcaacgttcaaattcgtagtttcggggaaa 8686
Query: 661 agaatacgctgaagtaaggtctctaacttcgcacgttcatcatttgagtaattactaact 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8685 agaatacgctgaagtaaggtctctaacttcgcacgttcatcatttgagtaattactaact 8626
Query: 721 ggaggcagagttttctgtaacgtagagaccgtagtaaaatcatgttggaaaaccgggatc 780
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 8625 ggaggcagagttttctgtaacgtagagaccgtaggtaaatcatgttggaaaaccgggatc 8566
Query: 781 tttgaaacagatttggtttgatgcctcttcgtaggagaatcgggaagatctagaagctca 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8565 tttgaaacagatttggtttgatgcctcttcgtaggagaatcgggaagatctagaagctca 8506
Query: 841 tgtttaacagtgtctggctcaccaccactgattctagaagtggtt-catttgtaattgtt 899
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 8505 tgtttaacagtgtctggctcaccaccactgattctagaagtggttccatttgtaattgtt 8446
Query: 900 gcagg-ctgaaa-tamttccttcgg-agtaacatt-ccatca-ttttattcgagctgttg 954
||||| |||||| || ||||||||| ||||||||| |||||| |||||||||||||||||
Sbjct: 8445 gcaggcctgaaattacttccttcggcagtaacattcccatcatttttattcgagctgttg 8386
Query: 955 -ttccgttatt 964
||||||||||
Sbjct: 8385 tttccgttatt 8375
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6305
Number of Sequences: 1807
Number of extensions: 6305
Number of successful extensions: 30
Number of sequences better than 1.0e-20: 1
length of query: 1002
length of database: 10,358,551
effective HSP length: 16
effective length of query: 986
effective length of database: 10,329,639
effective search space: 10185024054
effective search space used: 10185024054
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)